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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857788.1_cds_XP_016513529.1_26065
CDS Infomation

[gene=LOC107830479] [db_xref=GeneID:107830479] [protein=cathepsin B-like] [protein_id=XP_016513529.1] [location=complement(join(1962..2096,2389..2424,2513..2623,3469..3687,3824..3949,4033..4107,4208..4212,4314..4470,4587..4667,4760..4813,5894..5962))] [gbkey=CDS]
Sequence

ATGGCGATGAATCACATGTCCTTAGCCGCTCTCTTGCTTTTGATTGGTGCCTCTATCCTT
ATTTTACAGGTTGTTGCAGAACAACCAATATCCCAAGCTAAAGCGGAATCTGCAATCCTT
CAGGACTCAATTGTTAAACAGGTTAATGAAAATGAAAAAGCTGGATGGAAAGCTGCACTG
AACCCTCATTTCTCAAATTTCACGGTTTCCCAATTTAAGCGCCTTCTTGGAGTTAAGCCC
ACAAGAAAGGGTGATTTAAAGGGCATTCCTATTTTAACTCATCCGAAACTTTTGGAGTTA
CCACAAGAGTTTGATGCACGAGTGGCTTGGCCTAACTGTAGCACTATTGGGAGAATTCTT
GATCAGGGACACTGTGGTTCTTGTTGGGCTTTTGGTGCTGTTGAGTCACTGTCTGATCGT
TTCTGTATTCATTATGGCTTGAATATCTCTCTGTCAGCAAATGATCTCTTAGCATGCTGT
GGCTTTTTATGTGGGGATGGTTGTGATGGTGGATATCCGTTACAAGCTTGGAAGTACTTT
GTCCGCAAGGGTGTGGTCACAGATGAGTGTGACCCTTACTTTGATAATGAGGGATGTTCC
CACCCTGGATGTGAACCTGCATATCCCACCCCCAAGTGTCACAGGAAGTGCATTAAGCAG
AATTTACTCTGGAGTAAGTCCAAGCATTTTGGCGTCAATGCATACATGATCAGCTCCGAT
CCCCACAGTATAATGACAGAAGTTTACAAGAATGGACCAGTTGAGGTCTCTTTTACCGTT
TACGAGGATTTCGCTCACTACAAATCTGGAGTTTACAAGCATGTAACCGGTGATATAATG
GGAGGCCATGCTGTTAAACTCATCGGATGGGGAACTGAGGATGGAGAGGACTATTGGCTT
CTTGCCAATCAGTGGAACAGAGGCTGGGGTGATGATGGTTACTTTAAGATCAGAAGAGGA
ACAAACGAGTGTGAAATCGAAGATGAAGTGGTTGCAGGATTGCCTTCAGCCAGAAATCTG
AACATGGAACTTGATGTCTCTGATGCTTTCCTTGATGCCGCAATGTGA

Peptide Sequence

PEP ID

XP_016513529.1
PEP Infomation

PREDICTED: cathepsin B-like [Nicotiana tabacum]
Sequence

MAMNHMSLAALLLLIGASILILQVVAEQPISQAKAESAILQDSIVKQVNENEKAGWKAAL
NPHFSNFTVSQFKRLLGVKPTRKGDLKGIPILTHPKLLELPQEFDARVAWPNCSTIGRIL
DQGHCGSCWAFGAVESLSDRFCIHYGLNISLSANDLLACCGFLCGDGCDGGYPLQAWKYF
VRKGVVTDECDPYFDNEGCSHPGCEPAYPTPKCHRKCIKQNLLWSKSKHFGVNAYMISSD
PHSIMTEVYKNGPVEVSFTVYEDFAHYKSGVYKHVTGDIMGGHAVKLIGWGTEDGEDYWL
LANQWNRGWGDDGYFKIRRGTNECEIEDEVVAGLPSARNLNMELDVSDAFLDAAM

Transcript Sequence

Gene sequence data has not been registered.